Single-cell genomic profiling of antimicrobial resistance in Escherichia coli from the Densu River, Ghana
Ryoichi Saito
IntroductionRiver water serves as a natural reservoir for antimicrobial resistance (AMR) factors. Although environmental AMR poses a global threat to public health as it spreads to local communities through the microbiome in aquatic environments, the actual situation remains unclear, especially in developing countries. In this study, we sought microbiome data, including AMR information, for multiple bacterial strains from river water samples using a single-cell genomics platform.Methods and resu